Publications
All submitted published work that I’ve contributed to. Links available when possible.
Schafer DM, Blue SM, Xu S, Mizrahi O, Gosztyla ML, Street L, Rothamel KL, Tien RH, Elmsaouri S, Kopalle HM, Coufal NG, Jovanivic, Yeo EW. Modulation of the DNA/RNA Binding Protein ARID5A regulates microglial activation and response. In-Review Nature Neuroscience May 2025
Rhine K, Li R, Kopalle HM, Rothamel KL, Ge X, Epstein E, Mizrahi O, Madrigal AA, Her HL, Gomberg TA, Hermann A, Schwartz JL, Daniels AJ, Manor U, Ravits J, Signer RAJ, Bennett EJ, Yeo EW. Aging-linked deterioration of RNA metabolism destabilizes the stress response of neurons. In revision Nature Aging February 2025
Mei, Y., Gosztyla, M. L., Tan, X., Dozier, L. E., Wilkinson, B., McKetney, J., Lee, J., Chen, M., Tsai, D., Kopalle, H., Gritsenko, M. A., Hartel, N., Graham, N. A., Flores, I., Gilmore-Hall, S. K., Xu, S., Marquez, C. A., Liu, S. N., Fong, D., … Ideker, T. (2025). Integrated multi-omic characterizations of the synapse reveal RNA processing factors and ubiquitin ligases associated with neurodevelopmental disorders. Cell Systems, 101204, 101204.
Xu S, Nguyen GG, Naritomi JT, Kopalle HM, Yee BA, Rothamel KL, Boyle EA, Yeo GW. Protocol to process crosslinking and immunoprecipitation data into annotated binding sites. STAR Protoc. 2024 Jun 21;5(2):103040. doi: 10.1016/j.xpro.2024.103040. Epub 2024 Apr 26. PMID: 38669139; PMCID: PMC11066461.
Kopalle, H. (2019). Visualization of membrane-less granules in yeast and mammalian cells using modified fluorescence in-situ hybridization. UC San Diego. ProQuest ID: Kopalle_ucsd_0033M_18353. Merritt ID: ark:/13030/m5qp16d1.
Davidenko N, Kopalle HM, Bridgeman B. The upper eye bias: tilted face draw fixations to the upper eye. Perception. (2019) Feb;48(2):162-174. doi: 10.1177/0301006618819628. Epub 2018 Dec 27.
Klein, M., Kopalle, H., Chandra, J., Malinow, R. Exploring the synaptic basis of rapid antidepressant treatments in a congenital learned helplessness model. Biological Psychiatry (2018); (83) S129-S455, T175 https://doi.org/10.1016/j.biopsych.2018.02.512
Bridgeman B, Kopalle H. Open-loop locomotion on slopes. Perception; under review March 2016
Michael AK, Harvey SL, Sammons PJ, Anderson AP, Kopalle HM, Banham AH, Partch CL. Cancer/testis antigen PASD1 silences the circadian clock. Molecular Cell (2015); 58 http://dx.doi.org/10.1016/j.molcel.2015.03.031
Kopalle HM, Partch CL. An imPERfect link to cancer?. Cell Cycle (2014); 13:507 - 507; http://dx.doi.org/10.4161/cc.27862; PMID: 24496331